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Significant Genes


2.0 Fold Change

Disease

HIV (25)
HIV, Lymphoma (1)
HIV, Neurological disorders (4)
HIV, Tuberculosis (3)
HIV, Tuberculosis, IRIS (1)

Sample Source

Adipose tissue (1)
Brain (2)
CD4 T cells (7)
CD8 T cells (3)
Colon (1)
GALT (1)
Inguinal lymph node (1)
Jejunum (1)
Lung (1)
Lymph node biopsy (2)
Monocytes (4)
Myeloid Dendritic Cells (1)
Neck (1)
PBMC (8)
Whole Blood (7)

Species

Homo sapiens (34)

Platform

Affymetrix Affymetrix Human HG-Focus v1 (2)
Affymetrix FATMITO1a520158F v1 (1)
Affymetrix HG-U133A (5)
Affymetrix HG-U133_Plus_2 (11)
Illumina HumanHT-12 v3 (2)
Illumina HumanHT-12 v4 (7)
Illumina HumanRef-8 v3 (1)
Illumina HumanWG-6 v3 (5)

Institution

GEO (34)
Sample Set Platform Species Disease Sample Source Sample Count  
Expression data from HIV exposed and uninfected women - GSE33580 Homo sapiens HIV Whole Blood 86
Genome-wide analysis of gene expression in whole blood from HIV-1 progressors and non-progressors - GSE56837 Homo sapiens HIV Whole Blood 26
Gene-expression profiling of HIV-1 infection and perinatal transmission in Botswana - GSE4124 Homo sapiens HIV PBMC 45
Gene expression before HAART initiation predicts HIV-infected individuals at risk of poor CD4+ T cell recovery - GSE19087 Homo sapiens HIV PBMC 24
Differential Gene Expression of Soluble CD8+ T-cell mediated suppression of HIV replication in three older children - GSE23183 Homo sapiens HIV PBMC 3
Differential Gene Expression in HIV-Infected Individuals Following ART - GSE44228 Homo sapiens HIV PBMC 72
Chronic CD4+ T cell Activation & Depletion in HIV-1 Infection: Type I Interferon-Mediated Disruption of T Cell Dynamic - GSE9927 Homo sapiens HIV CD4 T cells 20
Comparison of CD4+ T cell function between HIV-1 resistant and HIV-1 susceptible individuals (Affymetrix) - GSE14278 Homo sapiens HIV CD4 T cells 18
Genome wide mRNA expression correlates of viral control in CD4+T cells from HIV-1 infected individuals - GSE18233 Homo sapiens HIV CD4 T cells 202
CD4+ T cell gene expression in virologically suppressed HIV-infected patients during Maraviroc intensification therapy - GSE56804 Homo sapiens HIV CD4 T cells 77
Transcriptional profiling of CD4 T-cells in HIV-1 infected patients - GSE23879 Homo sapiens HIV CD4 T cells, PBMC 40
Comparison of transcriptional profiles of CD4+ and CD8+ T cells from HIV-infected pateints and uninfected control group - GSE6740 Homo sapiens HIV CD4 T cells, CD8 T cells 40
Comparative analysis of genomic features of human HIV-1 infection and primate models of SIV infection - GSE28128 Homo sapiens HIV CD4 T cells, CD8 T cells 79
Comparison of gene expression profiles of HIV-specific CD8 T cells from controllers and progressors - GSE24081 Homo sapiens HIV CD8 T cells 42
Longitudinal comparison of monocytes from an HIV viremic vs avirmeic state - GSE5220 Homo sapiens HIV Monocytes 16
Transcriptome analysis of primary monocytes from HIV+ patients with differential responses to therapy - GSE52900 Homo sapiens HIV Monocytes 14
Transcriptome analysis of HIV-infected peripheral blood monocytes - GSE50011 Homo sapiens HIV, Neurological disorde ... Monocytes 86
Expression data from CD11c+ mDCs in HIV infection - GSE42058 Homo sapiens HIV Myeloid Dendritic Cells 8
Microarray Analysis of Lymphatic Tissue Reveals Stage-Specific, Gene-Expression Signatures in HIV-1 Infection - GSE16363 Homo sapiens HIV Lymph node biopsy 52
The Relationship between Virus Replication and Host Gene Expression in Lymphatic Tissue during HIV-1 Infection - GSE21589 Homo sapiens HIV Inguinal lymph node 42
Expression data from HAART interruption in HIV patients - GSE28177 Homo sapiens HIV GALT 6
The National NeuroAIDS Tissue Consortium Brain Gene Array: Two types of HIV-associated neurocognitive impairment - GSE35864 Homo sapiens HIV, Neurological disorde ... Brain 72
Genome wide transcriptional profiling of HIV positive and negative children with active tuberculosis, latent TB infection and other diseases - GSE39941 Homo sapiens HIV, Tuberculosis Whole Blood 491
Gene expression analysis of PBMC from HIV and HIV/TB co-infected patients - GSE50834 Homo sapiens HIV, Tuberculosis PBMC 44
HIV-1 infection in human PBMCs in vivo - GSE2171 Homo sapiens HIV PBMC 87
CD4+ T Cell Decline is Predicted by Differential Expression of Genes in HIV seropositive patients - GSE10924 Homo sapiens HIV PBMC 96
Whole Blood Transcriptional Response to Early Acute HIV - GSE29429-GPL10558 Homo sapiens HIV Whole Blood 47
Whole Blood Transcriptional Response to Early Acute HIV - GSE29429-GPL6947 Homo sapiens HIV Whole Blood 185
Blood Transcriptional Signature of hyperinflammation in HIV-associated Tuberculosis - GSE58411 Homo sapiens HIV, Tuberculosis, IRIS Whole Blood 107
Inflammation and macrophage activation in adipose tissue of HIV-infected patients under antiretroviral treatment - GSE19811 Homo sapiens HIV Adipose tissue 13
Fatigue-related HIV disease gene-networks identified in CD14+ cells isolated from HIV-infected patients - GSE18468 Homo sapiens HIV, Neurological disorde ... Monocytes 15
Gene Expression in Frontal Cortex in Major Depression and HIV - GSE17440 Homo sapiens HIV, Neurological disorde ... Brain 8
Molecular Classification of AIDS-Related Lymphomas - GSE17189 Homo sapiens HIV, Lymphoma Neck, Lung, Jejunum ... 17
Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases - GSE37250_family Homo sapiens HIV, Tuberculosis Whole Blood 537
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