SIDRA
Sample Set Annotation Tool
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Week after enrollment
New Group
Split Group Set
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View in Gene Expression Browser
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Groups
Healthy-E
400003957: GSM728361
400004053: GSM728459
400004054: GSM728460
400004056: GSM728462
400004058: GSM728464
400004059: GSM728465
400004060: GSM728466
400004061: GSM728467
400004064: GSM728470
400004071: GSM728477
400004103: GSM728509
400004104: GSM728510
400004114: GSM728520
400004116: GSM728522
400004117: GSM728523
400004120: GSM728526
400004121: GSM728527
400004123: GSM728529
400004124: GSM728530
400004125: GSM728531
400004126: GSM728532
400004127: GSM728533
400004132: GSM728538
0
samples selected
Move selected samples to group
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
Healthy-W1
400004115: GSM728521
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
Healthy-W8
400003956: GSM728360
400004051: GSM728457
400004052: GSM728458
400004055: GSM728461
400004057: GSM728463
400004062: GSM728468
400004063: GSM728469
400004118: GSM728524
400004119: GSM728525
400004122: GSM728528
400004128: GSM728534
400004129: GSM728535
400004130: GSM728536
400004131: GSM728537
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-E
400003948: GSM728352
400003952: GSM728356
400003959: GSM728363
400003964: GSM728368
400003970: GSM728374
400003976: GSM728380
400003982: GSM728386
400003987: GSM728392
400003993: GSM728398
400003998: GSM728403
400004003: GSM728408
400004009: GSM728414
400004017: GSM728422
400004021: GSM728426
400004027: GSM728432
400004033: GSM728439
400004039: GSM728445
400004045: GSM728451
400004066: GSM728472
400004072: GSM728478
400004077: GSM728483
400004083: GSM728489
400004087: GSM728493
400004090: GSM728496
400004094: GSM728500
400004100: GSM728506
400004105: GSM728511
400004110: GSM728516
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W1 ART-
400003953: GSM728357
400004010: GSM728415
400004015: GSM728420
400004022: GSM728427
400004028: GSM728433
400004034: GSM728440
400004040: GSM728446
400004046: GSM728452
400004088: GSM728494
400004097: GSM728503
400004106: GSM728512
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W1 ART+
400003960: GSM728364
400003965: GSM728369
400003971: GSM728375
400003979: GSM728383
400003983: GSM728387
400003988: GSM728393
400004004: GSM728409
400004065: GSM728471
400004073: GSM728479
400004078: GSM728484
400004084: GSM728490
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W2 ART-
400004011: GSM728416
400004016: GSM728421
400004026: GSM728431
400004029: GSM728434
400004035: GSM728441
400004041: GSM728447
400004047: GSM728453
400004091: GSM728497
400004095: GSM728501
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W2 ART+
400003961: GSM728365
400003966: GSM728370
400003972: GSM728376
400003977: GSM728381
400003984: GSM728388
400003989: GSM728394
400003994: GSM728399
400003999: GSM728404
400004005: GSM728410
400004067: GSM728473
400004074: GSM728480
400004079: GSM728485
400004085: GSM728491
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W4 ART-
400003949: GSM728353
400004012: GSM728417
400004018: GSM728423
400004023: GSM728428
400004030: GSM728435
400004036: GSM728442
400004042: GSM728448
400004049: GSM728455
400004092: GSM728498
400004096: GSM728502
400004101: GSM728507
400004107: GSM728513
400004111: GSM728517
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W4 ART+
400003958: GSM728362
400003967: GSM728371
400003973: GSM728377
400003978: GSM728382
400003990: GSM728395
400003995: GSM728400
400004000: GSM728405
400004006: GSM728411
400004068: GSM728474
400004080: GSM728486
400004086: GSM728492
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W8 ART+
400004007: GSM728412
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W12 ART-
400003950: GSM728354
400003954: GSM728358
400004013: GSM728418
400004020: GSM728425
400004024: GSM728429
400004031: GSM728436
400004037: GSM728443
400004043: GSM728449
400004048: GSM728454
400004089: GSM728495
400004093: GSM728499
400004098: GSM728504
400004102: GSM728508
400004108: GSM728514
400004112: GSM728518
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W12 ART+
400003962: GSM728366
400003968: GSM728372
400003974: GSM728378
400003980: GSM728384
400003985: GSM728389
400003991: GSM728396
400003996: GSM728401
400004001: GSM728406
400004069: GSM728475
400004075: GSM728481
400004081: GSM728487
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W24 ART-
HIV-W24 ART+
Move
Create sample set from this group
HIV-W24 ART-
400003951: GSM728355
400003955: GSM728359
400004014: GSM728419
400004019: GSM728424
400004025: GSM728430
400004032: GSM728437
400004038: GSM728444
400004044: GSM728450
400004050: GSM728456
400004099: GSM728505
400004109: GSM728515
400004113: GSM728519
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART+
Move
Create sample set from this group
HIV-W24 ART+
400003963: GSM728367
400003969: GSM728373
400003975: GSM728379
400003981: GSM728385
400003986: GSM728391
400003992: GSM728397
400003997: GSM728402
400004002: GSM728407
400004008: GSM728413
400004070: GSM728476
400004076: GSM728482
400004082: GSM728488
0
samples selected
Move selected samples to group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
Move
Create sample set from this group
Are you sure?
Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
!Sample Title
Age
Calculated viral set point
Cd4 count
Dataset
Ethnicity
Feibig stage
Gender
Illness
Race
Treatment
Viral load
Week
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Name
Display Order
Move
Move this group to
before
after
Healthy-E
Healthy-W1
Healthy-W8
HIV-E
HIV-W1 ART-
HIV-W1 ART+
HIV-W2 ART-
HIV-W2 ART+
HIV-W4 ART-
HIV-W4 ART+
HIV-W8 ART+
HIV-W12 ART-
HIV-W12 ART+
HIV-W24 ART-
HIV-W24 ART+
Move
Color
Create Groups
Split by
!Sample Title
Age
Calculated viral set point
Cd4 count
Dataset
Ethnicity
Feibig stage
Gender
Illness
Race
Treatment
Viral load
Week
(split into
185
groups)
Ex:
700010040E, 700010040W4, 700010040W12, 700010040W24, 700010077E
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release