SIDRA
Sample Set Annotation Tool
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Groups
VL below detection
400000922: GSM1212269
400000923: GSM1212270
400000924: GSM1212271
400000925: GSM1212272
400000926: GSM1212273
400000927: GSM1212274
400000928: GSM1212275
400000929: GSM1212276
400000930: GSM1212277
400000931: GSM1212278
400000932: GSM1212279
400000933: GSM1212280
400000934: GSM1212281
400000935: GSM1212282
400000936: GSM1212283
400000937: GSM1212284
400000938: GSM1212285
400000940: GSM1212287
400000941: GSM1212288
400000942: GSM1212289
400000943: GSM1212290
400000944: GSM1212291
400000945: GSM1212292
400000948: GSM1212295
400000950: GSM1212297
400000951: GSM1212298
400000952: GSM1212299
400000953: GSM1212300
400000954: GSM1212301
400000955: GSM1212302
400000958: GSM1212305
400000959: GSM1212306
400000961: GSM1212308
400000962: GSM1212309
400000964: GSM1212311
400000965: GSM1212312
400000966: GSM1212313
400000967: GSM1212314
400000968: GSM1212315
400000969: GSM1212316
400000971: GSM1212318
400000972: GSM1212319
400000973: GSM1212320
400000974: GSM1212321
400000975: GSM1212322
400000976: GSM1212323
400000977: GSM1212324
400000978: GSM1212325
400000979: GSM1212326
400000981: GSM1212328
400000982: GSM1212329
400000983: GSM1212330
400000984: GSM1212331
400000986: GSM1212333
400000987: GSM1212334
400000989: GSM1212336
400000990: GSM1212337
400000992: GSM1212339
400000993: GSM1212340
400000994: GSM1212341
400000996: GSM1212343
400000998: GSM1212345
400000999: GSM1212346
400001000: GSM1212347
400001002: GSM1212349
400001003: GSM1212350
400001004: GSM1212351
0
samples selected
Move selected samples to group
VL 20-600
VL >1000
Move
Create sample set from this group
VL 20-600
400000921: GSM1212268
400000939: GSM1212286
400000946: GSM1212293
400000947: GSM1212294
400000956: GSM1212303
400000963: GSM1212310
400000980: GSM1212327
400000985: GSM1212332
400000988: GSM1212335
400000991: GSM1212338
400000995: GSM1212342
400000997: GSM1212344
0
samples selected
Move selected samples to group
VL below detection
VL >1000
Move
Create sample set from this group
VL >1000
400000949: GSM1212296
400000957: GSM1212304
400000960: GSM1212307
400000970: GSM1212317
400001001: GSM1212348
400001005: GSM1212352
400001006: GSM1212353
0
samples selected
Move selected samples to group
VL below detection
VL 20-600
Move
Create sample set from this group
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New Group
Name
Split Group Set
Split Using
!Sample Title
Age
Alcohol
Anycancer
Artdate
Batch
Bmi
Cannabis
CD4 count
CD4 count group
Cell type
CNS penetration group
Cocaine
Date of closest visit
Depression scale
Developmental stage
Disease state
Height
History Of Cns Opport Inf
History Of Hiv-assoc Neurol Disease
Hivdate
Nadir CD4 count
Race
Smoke
VL group
Vload
Weight
YRS from seroconv
YRS from seroconv group
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
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Group Settings
Group
VL below detection
VL 20-600
VL >1000
Name
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Move this group to
before
after
VL below detection
VL 20-600
VL >1000
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Split by
!Sample Title
Age
Alcohol
Anycancer
Artdate
Batch
Bmi
Cannabis
CD4 count
CD4 count group
Cell type
CNS penetration group
Cocaine
Date of closest visit
Depression scale
Developmental stage
Disease state
Height
History Of Cns Opport Inf
History Of Hiv-assoc Neurol Disease
Hivdate
Nadir CD4 count
Race
Smoke
VL group
Vload
Weight
YRS from seroconv
YRS from seroconv group
(split into
86
groups)
Ex:
PBMC_1, PBMC_2, PBMC_3, PBMC_4, PBMC_5
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release